Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCGGACCAACATCCTGTGCACCGTGCGCGGCTGCGGC
(((((((((((..(((((((.&.))).)))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015251
GeneSymbolATMIN
Binding site263,305
Score0.846
Seed1
Au0.324
Energy-23.3
Binding len26
Me-8.574
Phylopstem3.967145090909091
Phylopflank3.4953766649999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure