Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGGCCGCGGCCCGCGGG
((((.((((((((((......&))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015251
GeneSymbolATMIN
Binding site170,187
Score0.846
Seed0
Au0.147
Energy-20.2
Binding len17
Me-8.29
Phylopstem0.38364022
Phylopflank0.4174634875
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure