Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAAATGCGGCTGTAGA
(((((((((((.((((.....&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330606
GeneSymbolTBC1D31
Binding site2878,2895
Score0.846
Seed1
Au0.647
Energy-17.8
Binding len17
Me-7.284
Phylopstem0.8908359818181819
Phylopflank0.5450493524999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure