Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACGTTGCAGCCTCTCTGGCCATTGCAGA
((((((((((((.((((((((&))))))))..)))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015254
GeneSymbolKIF13B
Binding site6343,6378
Score0.846
Seed1
Au0.338
Energy-21.9
Binding len35
Me-5.227
Phylopstem3.4451226666666663
Phylopflank4.664932544750002
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure