Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCGCAGCTGTAAG
(((((((((((((.((.....&)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015259
GeneSymbolICOSLG
Binding site4914,4931
Score0.923
Seed1
Au0.412
Energy-24.9
Binding len17
Me-4.794
Phylopstem-0.08396025384615385
Phylopflank-0.5300558962500002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure