Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCTGGCTGGAGG
((.(((((((((((((.....&)))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015260
GeneSymbolSIN3B
Binding site3330,3348
Score1.0
Seed0
Au0.368
Energy-22.2
Binding len18
Me-5.495
Phylopstem3.0494757142857147
Phylopflank2.89601555
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure