Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCTGCTGCAGA
(((((((.(((((((......&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015261
GeneSymbolNCAPD3
Binding site1973,1989
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len16
Me-6.484
Phylopstem-0.21690657142857142
Phylopflank-0.41240582375000007
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure