Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCCTTCCCCAGAGCAGCACTGCC
..(((((((((((((((((((&))))))))))).........)))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015261
GeneSymbolNCAPD3
Binding site5259,5290
Score0.923
Seed1
Au0.456
Energy-22.7
Binding len31
Me-4.957
Phylopstem3.9174817333333336
Phylopflank2.9561850712499993
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end8
Position3UTR
2D Structure