Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAGCTGCCGCTGCAC
.((((((.((((((((.(((.&))).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015262
GeneSymbolWASHC2C
Binding site3273,3293
Score0.865
Seed1
Au0.353
Energy-27.4
Binding len20
Me-6.107
Phylopstem-0.08698012499999996
Phylopflank0.2879409125000001
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure