Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACTGCGGCCTGCT
..((((((((((((.......&))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015265
GeneSymbolSATB2
Binding site3163,3177
Score1.0
Seed1
Au0.529
Energy-18.0
Binding len14
Me-5.925
Phylopstem3.914393484615385
Phylopflank3.5981270624999997
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end1
Position3UTR
2D Structure