Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACCCCAGTGCCAAGGTGAACCCCAACTTGCAGCGGCGGC
((((.(((((((.((((((((&)))))))).))........................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015267
GeneSymbolCUX2
Binding site4342,4388
Score0.846
Seed0
Au0.441
Energy-21.9
Binding len46
Me-9.346
Phylopstem2.021615375
Phylopflank2.7982715875000004
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end8
PositionCDS
2D Structure