Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACAGCCCAGCAGCC
..((.((((.((((((.((((&))))..)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015268
GeneSymbolDNAJC13
Binding site6714,6734
Score0.846
Seed0
Au0.5
Energy-21.5
Binding len20
Me-10.319
Phylopstem5.796825833333333
Phylopflank5.096545089999999
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure