Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCGCACAACCTCAGCTGGCAGA
(((((((((.((((((..(.(&).)..)))))).)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015268
GeneSymbolDNAJC13
Binding site6377,6400
Score0.923
Seed1
Au0.426
Energy-20.9
Binding len23
Me-5.18
Phylopstem4.6534095
Phylopflank4.523875695000001
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure