Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACAGTGCCAGGG
.((((((((....((((.....&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015272
GeneSymbolRPGRIP1L
Binding site4896,4909
Score0.923
Seed1
Au0.588
Energy-16.5
Binding len13
Me-12.497
Phylopstem0.22433962999999998
Phylopflank0.9000415037499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure