Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTGCAACCACCTGCAGTCCCGAGCAAGCCACCTGCAGC
((((((((((((((((((.((&)).))))))))....))))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015272
GeneSymbolRPGRIP1L
Binding site2454,2495
Score0.846
Seed1
Au0.485
Energy-19.3
Binding len41
Me-3.938
Phylopstem3.796493297297298
Phylopflank3.3525364
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end7
PositionCDS
2D Structure