Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTAACAACTGTAGCC
.....(((((((((((.((((&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015275
GeneSymbolWASHC4
Binding site2285,2302
Score0.846
Seed0
Au0.588
Energy-19.4
Binding len17
Me-13.666
Phylopstem5.380789772727272
Phylopflank5.7774625425
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure