Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATAATTTTCTGATCCAGAAAATACCAGCAGCTGCC
..(((((((((((........&.))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015275
GeneSymbolWASHC4
Binding site1147,1186
Score1.0
Seed1
Au0.588
Energy-19.4
Binding len14
Me-6.782
Phylopstem4.503504666666665
Phylopflank5.30944122375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure