Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGACCAGACCCAGCTCCTTAGCTGGCTGGGCTGGGGAGGG
...((((.(((((((((((((&))))))).........................)))))).)).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015276
GeneSymbolUSP22
Binding site3381,3426
Score0.885
Seed0
Au0.368
Energy-25.6
Binding len45
Me-8.828
Phylopstem0.4896398263157896
Phylopflank2.2922450899999993
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure