Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTGGCAGCTGCT
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015276
GeneSymbolUSP22
Binding site3433,3448
Score0.865
Seed1
Au0.397
Energy-20.9
Binding len15
Me-7.782
Phylopstem4.639237725000001
Phylopflank2.9222480900000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure