Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGGGCGTGCCAGGG
.((((((((.(..((((((...&)))))).).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015278
GeneSymbolSASH1
Binding site1893,1911
Score0.846
Seed1
Au0.324
Energy-21.6
Binding len18
Me-9.672
Phylopstem4.123950125
Phylopflank4.8329656925
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure