Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAGTTTCCATCTGCCGGAGCTGTGAG
((((((((.((((((..((((&))))..))..........)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015278
GeneSymbolSASH1
Binding site2667,2699
Score0.846
Seed1
Au0.368
Energy-21.2
Binding len32
Me-5.227
Phylopstem5.544551500000001
Phylopflank2.487537000625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure