Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGGACTGCAGCTGTT
..((((((((((((...((((&))))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015279
GeneSymbolTBC1D30
Binding site5253,5273
Score1.0
Seed1
Au0.574
Energy-26.6
Binding len20
Me-5.925
Phylopstem0.6536233666666665
Phylopflank0.6536238674999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure