Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAGGTCCCTGCTATGCAGCCGTGGCCACAGCTCGCAGC
(((((((((((((((((.(((&.))).))))))))......))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015283
GeneSymbolDPY19L1
Binding site4412,4455
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len30
Me-3.938
Phylopstem4.610925662500001
Phylopflank4.688968851249999
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure