Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTTCGACCCAGCTGCC
..(((((((.(((((.(((((&)).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015284
GeneSymbolSZT2
Binding site8460,8479
Score0.885
Seed1
Au0.382
Energy-22.7
Binding len19
Me-6.433
Phylopstem1.6330637142857143
Phylopflank1.813408255
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure