Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCATATGGCAGCTGCT
..((((((((.(((((..(((&)))...))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353981
GeneSymbolKDM5C
Binding site4555,4577
Score0.846
Seed1
Au0.382
Energy-21.9
Binding len22
Me-7.782
Phylopstem4.6612413749999995
Phylopflank5.401968544624999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure