Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAACCTGGCGGCAGCTGTG
..((((((((.(((((.((((&))))..))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353981
GeneSymbolKDM5C
Binding site2293,2316
Score0.923
Seed1
Au0.471
Energy-21.7
Binding len23
Me-7.782
Phylopstem2.13879725
Phylopflank2.9667888663749995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure