Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCTGTGGCTGA
...((((((((((((.(((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015288
GeneSymbolJADE2
Binding site2371,2389
Score1.0
Seed0
Au0.412
Energy-24.4
Binding len18
Me-6.748
Phylopstem1.0183026999999998
Phylopflank2.6565576424999993
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure