Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GACCTGCCATGTGTGCCC
....((((((((..((((.((.&)).))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015289
GeneSymbolVPS39
Binding site4556,4574
Score1.0
Seed0
Au0.426
Energy-15.4
Binding len18
Me-11.693
Phylopstem4.498484691250001
Phylopflank4.546284167874999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure