Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGAGAAGGCTGGAGA
.....((.(((((((((((..&))).)))))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015289
GeneSymbolVPS39
Binding site4735,4751
Score0.923
Seed0
Au0.515
Energy-22.1
Binding len16
Me-15.979
Phylopstem-0.3507375833333333
Phylopflank-0.39176581999999993
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure