Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGCCCACAGACTACAGAAAGCAGTTGCAGT
(((((((((((((.((.((((&)))))).)))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015289
GeneSymbolVPS39
Binding site1271,1307
Score0.846
Seed1
Au0.426
Energy-21.0
Binding len36
Me-4.794
Phylopstem-0.2818170214285714
Phylopflank-0.12747518749999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure