Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGTGAGGCTGCCCTAACTTCCATTAGGGG
...(((((((((((((((((.&))))).)))))))).............)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015291
GeneSymbolDNAJC16
Binding site5399,5431
Score0.846
Seed0
Au0.485
Energy-27.6
Binding len32
Me-6.515
Phylopstem-0.45929569032258055
Phylopflank-0.41451115874999994
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure