Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAAAGGGAGGCTGAGCAGTGGCTG
((.((((((((((((((..((&))...))))))))..)))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015291
GeneSymbolDNAJC16
Binding site3129,3154
Score1.0
Seed0
Au0.471
Energy-22.6
Binding len25
Me-5.495
Phylopstem0.27154574117647057
Phylopflank-0.24738330499999994
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure