Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAAACAGCTGCAC
.((((((((...(((.(((((&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015291
GeneSymbolDNAJC16
Binding site4867,4885
Score1.0
Seed1
Au0.618
Energy-20.0
Binding len18
Me-11.44
Phylopstem0.17200052500000004
Phylopflank0.10806241625000002
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure