Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGCTTCCTGATGTGCAAGTACCAACATCTGTAAAAGATATGCGCTATTGCCAGGTT
((((((((((((..((((((((&)))))))).........................))))...............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015295
GeneSymbolSMCHD1
Binding site3667,3728
Score0.846
Seed1
Au0.603
Energy-16.4
Binding len61
Me-6.084
Phylopstem3.33368803
Phylopflank3.589471040125
Longest consecutive pairings8
Position of longest consecutive pairings53
Pairings in 3prime end8
PositionCDS
2D Structure