Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAGCAATGCAAAAGCTTCCAGGAACAAGCCATGGAGGGTCA
.((((((.((((((((((...&))))))........................))..)).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015295
GeneSymbolSMCHD1
Binding site2529,2573
Score0.846
Seed1
Au0.544
Energy-22.2
Binding len44
Me-6.107
Phylopstem3.399717938888889
Phylopflank3.7216373037500015
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end5
PositionCDS
2D Structure