Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTACATGGCAGGGAGGGCTGCACTGACATTGATGCCTGGGG
.((((((((.((((((......&.))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015296
GeneSymbolDOCK9
Binding site7002,7047
Score1.0
Seed1
Au0.412
Energy-18.0
Binding len17
Me-5.036
Phylopstem5.934014444444445
Phylopflank5.17168993875
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end2
Position3UTR
2D Structure