Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGCACCTGGCTGCAGA
(((((((((..(((.((((((&)))))).)))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015302
GeneSymbolHAUS5
Binding site795,818
Score0.846
Seed1
Au0.338
Energy-23.3
Binding len23
Me-8.74
Phylopstem1.66190156
Phylopflank0.7310613125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure