Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCCAGCTGCAGCTCAT
.((.(((((((((((..((((&)))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015303
GeneSymbolVPS8
Binding site4385,4404
Score0.923
Seed0
Au0.5
Energy-20.1
Binding len19
Me-7.058
Phylopstem3.7444569999999997
Phylopflank2.09422426375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure