Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTGCTGCAGCG
.....((((((((.(.(((((&)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015303
GeneSymbolVPS8
Binding site1904,1920
Score0.846
Seed0
Au0.574
Energy-20.1
Binding len16
Me-14.755
Phylopstem2.7370047499999997
Phylopflank4.837535658749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure