Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGAATCGCAGCAGCGAG
((((.(((((((((.(..((.&)).).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015303
GeneSymbolVPS8
Binding site4301,4321
Score0.923
Seed0
Au0.412
Energy-20.2
Binding len20
Me-8.792
Phylopstem3.0095886666666667
Phylopflank2.3080662
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure