Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAAGACAAAATAAGGAAGGAAAACGTAGCTGCAGT
((((((((((((((.(((((.&))))).))).................))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015310
GeneSymbolPSD3
Binding site4290,4328
Score0.846
Seed1
Au0.632
Energy-22.0
Binding len38
Me-4.673
Phylopstem0.04887155483870966
Phylopflank-0.05670312875000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure