Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGAGCTGCAGCAGTAGG
((((.(((((((((.(((((.&)))))...))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015310
GeneSymbolPSD3
Binding site4036,4059
Score0.846
Seed0
Au0.441
Energy-21.2
Binding len23
Me-8.792
Phylopstem0.22335078888888887
Phylopflank0.5177185424999999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure