Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTCCACAGCTT
....(((((.((..(((((((&))))))).)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015310
GeneSymbolPSD3
Binding site7380,7397
Score0.846
Seed0
Au0.382
Energy-19.5
Binding len17
Me-12.935
Phylopstem0.1906938571428571
Phylopflank0.09556485037499998
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure