Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTGAGGACCAGCGGCTGCT
..((((((((((((.(..((.&))...).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015311
GeneSymbolOBSL1
Binding site1428,1449
Score0.836
Seed1
Au0.338
Energy-23.3
Binding len21
Me-5.692
Phylopstem2.2115542923076923
Phylopflank2.478099155
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure