Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCACAGTGTGGCAGCTGCAC
.(((((((((.(((((((((.&)))).))))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015313
GeneSymbolARHGEF12
Binding site5629,5652
Score0.923
Seed1
Au0.515
Energy-21.4
Binding len23
Me-6.618
Phylopstem1.1169453333333335
Phylopflank1.03958291
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure