Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGCCGCAGCTGCC
..(((((((((((.....(((&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015316
GeneSymbolPPP1R13B
Binding site120,136
Score0.846
Seed1
Au0.176
Energy-23.7
Binding len16
Me-6.782
Phylopstem-0.021305018181818194
Phylopflank0.10805671999999977
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure