Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCCAACATTGGCTTTTGGTCAGGGTCTTGCTACTGGCATGCCAGGC
.((((((((.(...((((....&.))))..).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015317
GeneSymbolPUM2
Binding site1510,1559
Score0.923
Seed1
Au0.515
Energy-18.3
Binding len18
Me-10.529
Phylopstem3.27259575
Phylopflank3.9929878124999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure