Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGGCTGCAGAGTAATTCAGCGCATCCTAGAGCATTGCACTGCAGA
((((((((((((((((((((.&)))))))))))))).............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015317
GeneSymbolPUM2
Binding site2909,2959
Score0.923
Seed1
Au0.544
Energy-23.9
Binding len50
Me-3.938
Phylopstem5.8575025714285704
Phylopflank5.630562322499999
Longest consecutive pairings14
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure