Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACCGCCGCTGCAGC
(((((((.((((.(((..(((&)))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015320
GeneSymbolARHGEF4
Binding site5558,5577
Score0.954
Seed1
Au0.265
Energy-22.9
Binding len19
Me-7.54
Phylopstem-0.04126428571428572
Phylopflank-0.5810150000000001
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure