Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGAGGTGGCCAGGG
.((((((.(((..(((......&)))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015321
GeneSymbolCRTC1
Binding site2805,2821
Score0.846
Seed1
Au0.588
Energy-16.3
Binding len16
Me-10.743
Phylopstem0.33186166666666667
Phylopflank-0.110360775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure